A large scale quantum computer will require optical interconnects, regardless of the qubit platform, thus allowing a modular architecture with full connectivity. Atomic systems are natural memory nodes for photonic interfaces, especially atomic ions, which already feature high-performance local quantum gates and near-perfect initialization and measurement. There are several atom/photon interface prototols for heralded remote entanglement using photonic qubits encoded in polarization, frequency, or time-bin.
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